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<!DOCTYPE art SYSTEM 'http://www.biomedcentral.com/xml/article.dtd'>
<art>
   <ui>1475-2867-8-2</ui>
   <ji>1475-2867</ji>
   <fm>
      <dochead>Primary research</dochead>
      <bibl>
         <title>
            <p>Polyamine depletion induces G<sub>1 </sub>and S phase arrest in human retinoblastoma Y79 cells</p>
         </title>
         <aug>
            <au id="A1">
               <snm>Ueda</snm>
               <fnm>Akiko</fnm>
               <insr iid="I1"/>
               <email>aueda-tky@umin.ac.jp</email>
            </au>
            <au id="A2">
               <snm>Araie</snm>
               <fnm>Makoto</fnm>
               <insr iid="I1"/>
               <email>araie-tky@umin.ac.jp</email>
            </au>
            <au id="A3" ca="yes">
               <snm>Kubota</snm>
               <fnm>Shunichiro</fnm>
               <insr iid="I2"/>
               <email>kubota@idaten.c.u-tokyo.ac.jp</email>
            </au>
         </aug>
         <insg>
            <ins id="I1">
               <p>Department of Ophthalmology, Graduate School of Medicine, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-0033, Japan</p>
            </ins>
            <ins id="I2">
               <p>Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan</p>
            </ins>
         </insg>
         <source>Cancer Cell International</source>
         <issn>1475-2867</issn>
         <pubdate>2008</pubdate>
         <volume>8</volume>
         <issue>1</issue>
         <fpage>2</fpage>
         <url>http://www.cancerci.com/content/8/1/2</url>
         <xrefbib>
            <pubidlist>
               <pubid idtype="pmpid">18208615</pubid>
               <pubid idtype="doi">10.1186/1475-2867-8-2</pubid>
            </pubidlist>
         </xrefbib>
      </bibl>
      <history>
         <rec>
            <date>
               <day>25</day>
               <month>9</month>
               <year>2007</year>
            </date>
         </rec>
         <acc>
            <date>
               <day>21</day>
               <month>1</month>
               <year>2008</year>
            </date>
         </acc>
         <pub>
            <date>
               <day>21</day>
               <month>1</month>
               <year>2008</year>
            </date>
         </pub>
      </history>
      <cpyrt>
         <year>2008</year>
         <collab>Ueda et al; licensee BioMed Central Ltd.</collab>
         <note>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</note>
      </cpyrt>
      <abs>
         <sec>
            <st>
               <p>Abstract</p>
            </st>
            <sec>
               <st>
                  <p>Background</p>
               </st>
               <p>Polyamines and ornithine decarboxylase (ODC) are essential for cell proliferation. DL-&#945;-difluoromethylornithine (DFMO), a synthetic inhibitor of ODC, induces G<sub>1 </sub>arrest through dephosphorylation of retinoblastoma protein (pRb). The effect of DFMO on cell growth of pRb deficient cells is not known. We examined the effects of DFMO on pRb deficient human retinoblastoma Y79 cell proliferation and its molecular mechanism.</p>
            </sec>
            <sec>
               <st>
                  <p>Methods</p>
               </st>
               <p>Using cultured Y79 cells, the effects of DFMO were studied by using polyamine analysis, western blot, gel shift, FACS and promoter analysis.</p>
            </sec>
            <sec>
               <st>
                  <p>Results</p>
               </st>
               <p>DFMO suppressed the proliferation of Y79 cells, which accumulated in the G1 and S phase. DFMO induced p27/Kip1 protein expression, p107 dephosphorylation and accumulation of p107/E2F-4 complex in Y79 cells.</p>
            </sec>
            <sec>
               <st>
                  <p>Conclusion</p>
               </st>
               <p>These results indicate that p107 dephosphorylation and accumulation of p107/E2F-4 complex is involved in G<sub>1 </sub>and S phase arrest of DFMO treated Y79 cells.</p>
            </sec>
         </sec>
      </abs>
   </fm>
   <bdy>
      <sec>
         <st>
            <p>Background</p>
         </st>
         <p>The polyamines, spermidine, spermine, and their precursor putrescine are essential for cell growth and the regulation of the cell cycle <abbrgrp><abbr bid="B1">1</abbr><abbr bid="B2">2</abbr></abbrgrp>. Many reports describe increased polyamine and ODC levels in various cancers <abbrgrp><abbr bid="B3">3</abbr><abbr bid="B4">4</abbr><abbr bid="B5">5</abbr><abbr bid="B6">6</abbr><abbr bid="B7">7</abbr></abbrgrp>. Intracellular polyamine levels are regulated and primarily depend on the activity of ornithine decarboxylase (ODC), which catalyzes the first rate-limiting step in polyamine biosynthesis <abbrgrp><abbr bid="B8">8</abbr></abbrgrp>. Depletion of polyamines by DL-&#945;-difluoromethylornithine (DFMO), a specific inhibitor of ODC, has been reported to inhibit growth of various kinds of cells <abbrgrp><abbr bid="B3">3</abbr><abbr bid="B4">4</abbr><abbr bid="B9">9</abbr><abbr bid="B10">10</abbr><abbr bid="B11">11</abbr></abbrgrp>. DFMO induces expression of CDK inhibitors such as p21 and p27 <abbrgrp><abbr bid="B12">12</abbr><abbr bid="B13">13</abbr><abbr bid="B14">14</abbr></abbrgrp> and G<sub>1 </sub>arrest associated with hypophosphorylation of pRb <abbrgrp><abbr bid="B13">13</abbr></abbrgrp>.</p>
         <p>P16, one of the major p16 CDK inhibitor family, competes with cyclin D to bind with CDK4 and CDK6, and the both p21 and p27 which are p21 CDK inhibitor family associate with cyclin/CDK complexes including CDK2, 4 and 6. It is established that increased expression of p16, p21 or p27 suppreses CDK activities, which leads to cell cycle arrest <abbrgrp><abbr bid="B15">15</abbr><abbr bid="B16">16</abbr></abbrgrp>.</p>
         <p>The pRb protein and E2F are thought to be a critical component in the control of the restriction point of the G<sub>1</sub>/S transition of the cell cycle <abbrgrp><abbr bid="B17">17</abbr></abbrgrp>. Free E2F activates E2F-dependent transcription of genes required for S-phase entry. E2F/pRb complex represses transcriptional activity of E2F <abbrgrp><abbr bid="B18">18</abbr></abbrgrp>. When pRb protein is phosphorylated by cyclin CDK complexes, the E2F/pRb complex is disrupted, and the released E2Fs from pRb lead to activation of E2F target genes <abbrgrp><abbr bid="B17">17</abbr><abbr bid="B18">18</abbr></abbrgrp>. p107 and p130 are similar to pRb in their structures and functions <abbrgrp><abbr bid="B18">18</abbr><abbr bid="B19">19</abbr></abbrgrp>. E2F-1, E2F-2, and E2F-3 bind almost exclusively to pRb; E2F-4 binds to p107 and p130 with high affinity, and also associates with pRb in some cell types; E2F-5 associates with p130 <abbrgrp><abbr bid="B18">18</abbr></abbrgrp>.</p>
         <p>Overexpression experiments have revealed that each of pRb family proteins can induce G<sub>1 </sub>cell cycle arrest <abbrgrp><abbr bid="B20">20</abbr><abbr bid="B21">21</abbr><abbr bid="B22">22</abbr><abbr bid="B23">23</abbr></abbrgrp>. Recently, it has been reported that p107 blocks cell cycle inside S phase in addition to G<sub>1 </sub>arrest <abbrgrp><abbr bid="B24">24</abbr></abbrgrp>.</p>
         <p>Since little is known about effects of DFMO on cell growth of pRb deficient cells, we examined whether DFMO has an anti-proliferative effect and how DFMO affects cell cycle in human retinoblastoma Y79 cells that lack functional pRb protein.</p>
      </sec>
      <sec>
         <st>
            <p>Results</p>
         </st>
         <sec>
            <st>
               <p>Inhibition of Y79 cell growth and induction of G<sub>1 </sub>and S phase arrest by DFMO</p>
            </st>
            <p>Preliminary experiment showed that DFMO (1&#8211;5 mM) inhibited Y79 cell growth in a dose-dependent manner (not shown). Therefore, we used 5 mM DFMO in the present study. The effects of 5 mM DFMO on Y79 cell growth were studied. After 72 h and 96 h, 5 mM DFMO inhibited Y79 cell growth 34.5 &#177; 3.97 and 53.5 &#177; 3.7%, respectively, compared to control without DFMO treatment (p &lt; 0.001) (Fig. <figr fid="F1">1A</figr>). The growth suppression by 5 mM DFMO was completely restored by addition of 20 mM putrescine, indicating the specificity of the effect of DFMO on cell growth and the involvement of polyamines in Y79 cell growth. Viabilities of the cells treated with 5 mM DFMO were 96.6 &#177; 1.08 %, 96.67 &#177; 2.65 %, 95.88 &#177; 1.32 %, and 96.83 &#177; 1.58 % after 24 h, 48 h, 72 h, and 96 h respectively (not significant, compared to that observed at 0 h) (Fig. <figr fid="F1">1B</figr>). The results suggest that DFMO did not induce Y79 cell death. We next analyzed the effect of DFMO on ODC activities and polyamine levels in cells. DFMO (5 mM) treatment decreased ODC activities 96.7 &#177; 0.81 % and 99.6 &#177; 0.01 at 24 h and 48 h, respectively, compared to that observed at 0 h (p &lt; 0.001) (Table <tblr tid="T1">1</tblr>). The levels of putrescine, spermidine, and spermine were significantly reduced at 24 h and 48 h (Table <tblr tid="T2">2</tblr>).</p>
            <fig id="F1">
               <title>
                  <p>Figure 1</p>
               </title>
               <caption>
                  <p>Effects of DFMO on Y79 cell growth</p>
               </caption>
               <text>
                  <p><b>Effects of DFMO on Y79 cell growth</b>. A: Y79 cells were treated with 5 mM DFMO over a 96 h period, and cell number was counted. B: Cell viability was analyzed with trypan blue dye exclusion test. Significantly different compared to 0 h: *p &lt; 0.01</p>
               </text>
               <graphic file="1475-2867-8-2-1"/>
            </fig>
            <tbl id="T1">
               <title>
                  <p>Table 1</p>
               </title>
               <caption>
                  <p>ODC activities of Y79 cells treated with DFMO</p>
               </caption>
               <tblbdy cols="4">
                  <r>
                     <c ca="center">
                        <p>0 h</p>
                     </c>
                     <c ca="center">
                        <p>24 h</p>
                     </c>
                     <c ca="center">
                        <p>48 h</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c cspan="4">
                        <hr/>
                     </c>
                  </r>
                  <r>
                     <c ca="center">
                        <p>13.33 &#177; 1.17</p>
                     </c>
                     <c ca="center">
                        <p>0.66 &#177; 0.01*</p>
                     </c>
                     <c ca="center">
                        <p>0.05 &#177; 0.001*</p>
                     </c>
                     <c ca="center">
                        <p>(nmolCO<sub>2</sub>/h/mg protein)</p>
                     </c>
                  </r>
               </tblbdy>
               <tblfn>
                  <p>Significantly different compared to 0 h: *p &lt; 0.001</p>
               </tblfn>
            </tbl>
            <tbl id="T2">
               <title>
                  <p>Table 2</p>
               </title>
               <caption>
                  <p>Polyamine levels of Y79 cells treated with DFMO</p>
               </caption>
               <tblbdy cols="5">
                  <r>
                     <c>
                        <p/>
                     </c>
                     <c ca="left">
                        <p>Putrescine</p>
                     </c>
                     <c ca="left">
                        <p>Spermidine</p>
                     </c>
                     <c ca="left">
                        <p>Spermine</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c cspan="5">
                        <hr/>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>0 h</p>
                     </c>
                     <c ca="left">
                        <p>1643.7 &#177; 143.2</p>
                     </c>
                     <c ca="left">
                        <p>1014.1 &#177; 235.1</p>
                     </c>
                     <c ca="left">
                        <p>659.3 &#177; 96.2</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>24 h</p>
                     </c>
                     <c ca="left">
                        <p>90.5 &#177; 22.7*</p>
                     </c>
                     <c ca="left">
                        <p>597.7 &#177; 118.2**</p>
                     </c>
                     <c ca="left">
                        <p>405.7 &#177; 102.9***</p>
                     </c>
                     <c>
                        <p/>
                     </c>
                  </r>
                  <r>
                     <c ca="left">
                        <p>48 h</p>
                     </c>
                     <c ca="left">
                        <p>45.8 &#177; 9.5*</p>
                     </c>
                     <c ca="left">
                        <p>221.7 &#177; 87.6**</p>
                     </c>
                     <c ca="left">
                        <p>422.8 &#177; 87.5***</p>
                     </c>
                     <c ca="left">
                        <p>(nmol/10<sup>5 </sup>cells)</p>
                     </c>
                  </r>
               </tblbdy>
               <tblfn>
                  <p>Significantly different compared to 0 h</p>
                  <p>*p &lt; 0.0001, **p &lt; 0.002, ***p &lt; 0.03</p>
               </tblfn>
            </tbl>
            <p>Cell cycle analysis was done using a flow cytometer. As shown in Fig. <figr fid="F2">2A</figr> and <figr fid="F2">2B</figr>, the percentages of G<sub>1 </sub>phase cells were significantly increased at 48 h and 72 h. The percentages of G<sub>2 </sub>phase cells were significantly reduced at 48 h and 72 h. These data suggest that DFMO treatment blocked cell cycle inside S phase in addition to G<sub>1 </sub>arrest.</p>
            <fig id="F2">
               <title>
                  <p>Figure 2</p>
               </title>
               <caption>
                  <p>Effects of DFMO on Y79 cell cycle</p>
               </caption>
               <text>
                  <p><b>Effects of DFMO on Y79 cell cycle</b>. Y79 cells were treated with 5 mM DFMO for 24, 48, and 72 h. Cell cycle was analyzed using a flow cytometer (A), as described under Experimental Procedures, and percentages of G<sub>1</sub>, S, and G<sub>2 </sub>phase cells are shown (B). Significantly different compared to 0 h: *p &lt; 0.01</p>
               </text>
               <graphic file="1475-2867-8-2-2"/>
            </fig>
         </sec>
         <sec>
            <st>
               <p>Effects of polyamine depletion on expression of CDK inhibitors and pRb family proteins</p>
            </st>
            <p>To study the mechanism of S and G<sub>1 </sub>phase arrest, we studied the effect of DFMO on the expression of CDK inhibitors and pRb family proteins. The expression of p27 was markedly induced by DFMO treatment. The magnitude of induction at 24 h and 48 h was 235% and 268%, respectively, compared to that at 0 h (100%). Addition of putrescine rescued the effect of DFMO. In contrast, p16 and p21 were not significantly changed (Fig. <figr fid="F3">3A</figr>). We confirmed that Y79 cells did not express pRb using western blot analysis (Fig. <figr fid="F3">3B</figr>), and examined the expression of p107 and p130 proteins. Hypophosphorylated forms of p107 accumulated at 24 h and 48 h after DFMO treatment (Fig. <figr fid="F3">3B</figr>). On the contrary, the expression levels of each form of p130 protein did not change until 48 h after DFMO treatment (Fig. <figr fid="F3">3B</figr>).</p>
            <fig id="F3">
               <title>
                  <p>Figure 3</p>
               </title>
               <caption>
                  <p>Expression of CDK inhibitors and pRb family proteins</p>
               </caption>
               <text>
                  <p><b>Expression of CDK inhibitors and pRb family proteins</b>. A: Y79 cells were treated with 5 mM DFMO for 24 and 48 h. Cell lysates (100 &#956;g) were subjected to western blot analysis using the antibodies against p16, p21, p27, and cytochrome c (as a control). Quantification of the bands was performed using the NIH image software, and corrected using the levels of cytochrome c. The data were expressed as %, compared to that observed at 0 h (100%). The experiments were repeated twice and similar results were obtained. A typical result is presented. B: Cell lysates (100 &#956;g) of Y79 cells and Jurkat cells (positive control) were subjected to western blot analysis using the antibody against pRb (upper panel). Y79 cells were treated with 5 mM DFMO for 24 and 48 h. Cell lysates (50 &#956;g) were subjected to western blot analysis using the antibodies against p107 and p130 (middle and lower panels). Signals were visualized using ECL. pp107 and p107 indicate hyperphosphorylated p107 and hypophosphorylated p107, respectively. 1, 2, and 3 indicate phosphorylated forms of p130.</p>
               </text>
               <graphic file="1475-2867-8-2-3"/>
            </fig>
         </sec>
         <sec>
            <st>
               <p>Polyamine depletion increased p107/E2F-4 complex</p>
            </st>
            <p>Since p107 is known to be associated with E2F-4 <abbrgrp><abbr bid="B24">24</abbr><abbr bid="B25">25</abbr></abbrgrp>, C-Myc <abbrgrp><abbr bid="B26">26</abbr><abbr bid="B27">27</abbr></abbrgrp>, and B-Myb <abbrgrp><abbr bid="B28">28</abbr></abbrgrp>, and suppress their transcriptional activities, we investigated whether DFMO induced binding of these proteins with p107. Whole cell extracts (100 &#956;g protein) derived from cells treated with DFMO for 0 h, 24 h, and 48 h were immunoprecipitated with antibody against E2F-4 or C-Myc. Immunoprecipitated proteins were analyzed by western blotting using anti p107 antibody. The p107/E2F-4 complex was detected at 0 h, and DFMO treatment induced 1.6 &#177; 0.2- and 1.8 &#177; 0.2-fold increase in amount of the complex at 24 h and 48 h, respectively, compared to 0 h (p &lt; 0.01) (Fig. <figr fid="F4">4A</figr>). Putrescine (20 &#956;M) blocked the increase of the amount of p107/E2F-4 complex, indicating the specificity of the effect of DFMO on binding of E2F-4 with p107. Other E2F family proteins (E2F1, 2, 3, and 5) were detected in DFMO treated Y79 cells (Fig. <figr fid="F4">4B</figr>, lower panel), but the complex between p107 and these proteins were not detected (Fig. <figr fid="F4">4B</figr>, upper panel). Although C-Myc was detected in DFMO treated Y79 cells (Fig. <figr fid="F4">4C</figr>, right panel), the complex of p107 and c-Myc was not detected (Fig. <figr fid="F4">4C</figr>, left panel). Whole cell extracts (100 &#956;g protein) derived from cells treated with DFMO for 0 h, 24 h, and 48 h were immunoprecipitated with antibody against p107. Immunoprecipitated proteins were analyzed by western blotting using anti B-Myb antibody and the complex of p107 and B-Myb was not detected (Fig. <figr fid="F4">4D</figr>, left panel). It has been reported that pRb and pRb family protein can directly regulate DNA replication by their association with MCM7/CDC47 <abbrgrp><abbr bid="B29">29</abbr></abbrgrp>. Therefore, we analyzed the MCM7-immunoprecipitated whole cell extracts by western blotting using anti p107 antibody. The complex of p107 and MCM7 was detected, but it was not increased by DFMO treatment (Fig. <figr fid="F4">4E</figr>).</p>
            <fig id="F4">
               <title>
                  <p>Figure 4</p>
               </title>
               <caption>
                  <p>Effects of DFMO on association of p107 and cellular proteins</p>
               </caption>
               <text>
                  <p><b>Effects of DFMO on association of p107 and cellular proteins</b>. A: Effects of DFMO on p107/E2F complexes in Y79 cells. Whole cell lysates (100 &#956;g) treated with 5 mM DFMO for 0, 24, 48 h or 5 mM DFMO and 20 &#956;M putrescine for 48 h were immunoprecipitated with anti E2F-4 antibody and immunoblotted with anti p107 anitibody. B: Cell lysates (100 &#956;g) were immunoprecipitated with anti E2F-1, 2, 3, and 5 antibodies and immunoblotted with anti p107 anitibody (upper panels) or with anti E2F-1, 2, 3, and 5 antibodies (lower panels). C: Cell lysates (100 &#956;g) were immunoprecipitated with anti C-Myc antibody and immunoblotted with anti p107 anitibody (left panel). The lysate of Y79 cells treated with DFMO for 24 h were immunoprecipitated with anti C-Myc antibody and immunoblotted with anti C-Myc antibody (right panel). D: Cell lysates (100 &#956;g) were immunoprecipitated with anti p107 antibody and immunoblotted with anti B-Myb anitibody (left panel). The lysate of Y79 cells treated with DFMO for 24 h were immunoprecipitated with anti p107 antibody and immunoblotted with anti p107 antibody (right panel). E: Cell lysates (100 &#956;g) were immunoprecipitated with anti MCM7 antibody and immunoblotted with anti p107 anitibody.</p>
               </text>
               <graphic file="1475-2867-8-2-4"/>
            </fig>
         </sec>
         <sec>
            <st>
               <p>p107/E2F-4 complex binds to E2F binding site</p>
            </st>
            <p>To clarify whether p107 is involved in repression of E2F by DFMO we performed gel shift assay using E2F consensus oligonucleotides. A fast migrating complex (Fig. <figr fid="F5">5A, b</figr>), and a complex migrating at slower rate (Fig. <figr fid="F5">5A, a</figr>) were apparent in DFMO treated Y79 cells. Complex b did not change significantly by DFMO treatment. The magnitudes of increase of complex a were 2.4 &#177; 0.3- and 2.4 &#177; 0.5-fold at 24 h and 48 h, respectively, compared to 0 h (p &lt; 0.01) (Fig. <figr fid="F5">5A</figr> lanes 2 and 3). The binding activity in these complexes was due to E2F, as it was competed out by excess unlabeled wild type E2F consensus binding site oligonucleotides, but not by their mutants (Fig. <figr fid="F5">5A</figr> lanes 8 and 9). The addition of specific antibodies against E2F-4 and p107 to the reaction mixtures confirmed that the complex a contains E2F-4 and p107 (Fig. <figr fid="F5">5A</figr> lanes 6 and 7).</p>
            <fig id="F5">
               <title>
                  <p>Figure 5</p>
               </title>
               <caption>
                  <p>Effect of DFMO on E2F transcriptional activity</p>
               </caption>
               <text>
                  <p><b>Effect of DFMO on E2F transcriptional activity</b>. A: E2F electoromobility shift assays using 10 &#956;g of nuclear extracts from DFMO treated Y79 cells and E2F binding oligonucleotides. Lanes 1&#8211;4 : Nuclear extracts from Y79 cells treated with 5 mM DFMO for 0, 24, 48 h or 5 mM DFMO and 20 &#956;M putrescine for 48 h were incubated as described under Experimental. Lanes 5&#8211;7 : Nuclear extracts from Y79 cells treated with 5 mM DFMO for 24 h were preincubated with control IgG, E2F-4 antibody, and p107 antibody, respectively. Lanes 8, 9 : Nuclear extracts from Y79 cells treated with 5 mM DFMO for 24 h were incubated with 50 ng of unlabeled competitor (WT and MT, respectively). B: One &#956;g of pE2WTx4-Luc and 10 ng of pRL-CMV were co-transfected into Y79 cells (5 &#215; 10<sup>5</sup>) using FuGene&#8482; Transfection Reagent. After 24 h culture media were changed to RPMI 1640 media with or without 5 mM DFMO or 5 mM DFMO and 20 &#956;M putrescine. Cell lysates were prepared at 24 h, 48 h and 72 h after the addition of DFMO, and examined for luciferase activity to monitor the promoter activity. Significantly different compared to control cells: *p &lt; 0.02</p>
               </text>
               <graphic file="1475-2867-8-2-5"/>
            </fig>
         </sec>
         <sec>
            <st>
               <p>Effect of DFMO on E2F transcriptional activity</p>
            </st>
            <p>To further clarify whether p107 is involved in transcriptional repression of E2F by DFMO we performed reporter assay using artificially synthesized four tandem repeats (E2WTx4) of the adenovirus E2 enhancer, which has two typical E2F-binding sites <abbrgrp><abbr bid="B30">30</abbr></abbrgrp>. The plasmids, pE2WTx4 and pRL-CMV were cotransfected into Y79 cells. After 24 h culture media were changed to RPMI 1640 media with or without 5 mM DFMO or 5 mM DFMO and 20 &#956;M putrescine. Cell lysates were prepared at indicated times after the addition of DFMO, and examined for luciferase activity to monitor the promoter activity. Luciferase activity was reduced by DFMO treatment to 76.7 &#177; 3.3%, 66.7 &#177; 5.5%, 55.7 &#177; 4.1% at 24 h, 48 h, and 72 h, respectively, compared to control (p &lt; 0.02) (Fig. <figr fid="F5">5B</figr>). The addition of 20 &#956;M putrescine completely restored the luciferase activity to the level of control, indicating the specificity of DFMO effect on E2F promoter activity.</p>
         </sec>
      </sec>
      <sec>
         <st>
            <p>Discussion</p>
         </st>
         <p>Our results demonstate that DFMO has anti-proliferative effects even in pRb deficient cells, and suggest that p107 may play an important role in cell cycle control of Y79 cells.</p>
         <p>There are several reports that DFMO induces G<sub>1 </sub>arrest in various kinds of cells <abbrgrp><abbr bid="B12">12</abbr><abbr bid="B13">13</abbr><abbr bid="B14">14</abbr></abbrgrp>. It was reported that pRb is dephosphorylated by DFMO treatment <abbrgrp><abbr bid="B13">13</abbr></abbrgrp>. Induction of CDK inhibitors that regulate pRb phosphorylation has been reported in cells treated with DFMO <abbrgrp><abbr bid="B12">12</abbr><abbr bid="B13">13</abbr><abbr bid="B14">14</abbr></abbrgrp>. However, it is unknown about the effect of DFMO on growth and cell cycle of cells that lacks pRb expression. In this study we showed for the first time that p107 is involved in cell cycle control in response to polyamine depletion in Y79 cells.</p>
         <p>In the present study we showed that expression of p27, but not p16 and p21, was increased after DFMO treatment. As it is established that p27 suppresses CDK activities and leads to cell cycle arrest <abbrgrp><abbr bid="B15">15</abbr><abbr bid="B16">16</abbr></abbrgrp>, it is reasonably assumed that increased expression of p27 by DFMO suppressed CDK activities, which led to cell cycle arrest in the present study.</p>
         <p>p107 plays an important role in cell cycle control by making complex with E2F-4 <abbrgrp><abbr bid="B24">24</abbr><abbr bid="B25">25</abbr></abbrgrp>, c-Myc <abbrgrp><abbr bid="B26">26</abbr><abbr bid="B27">27</abbr></abbrgrp>, B-Myb <abbrgrp><abbr bid="B28">28</abbr></abbrgrp> and MCM7 <abbrgrp><abbr bid="B29">29</abbr></abbrgrp>. When E2F/p107 complex binds to promoters, p107 recruits histone deacetylase complexes, which repress promoter activity <abbrgrp><abbr bid="B30">30</abbr><abbr bid="B31">31</abbr><abbr bid="B32">32</abbr><abbr bid="B33">33</abbr><abbr bid="B34">34</abbr></abbrgrp>. Binding of E2F-4 to p107 was reported to protect E2F-4 from degradation, and this may contribute to the maintenance of active transcriptional repression in quiescent cells <abbrgrp><abbr bid="B35">35</abbr></abbrgrp>. It was reported that p107 act as a tumor suppressor function in pRb deficient mouse <abbrgrp><abbr bid="B36">36</abbr></abbrgrp>. Recently, the unique role of p107 inhibiting S phase progression of cells that have already passed the G<sub>1 </sub>restriction point receives much attention <abbrgrp><abbr bid="B24">24</abbr><abbr bid="B37">37</abbr><abbr bid="B38">38</abbr></abbrgrp>. Kondo et al. reported the involvement of p107 in the inhibition of S phase progression in response to DNA-damaging agent <abbrgrp><abbr bid="B37">37</abbr></abbrgrp>. Our data suggest that p107 is involved in not only S phase arrest but also G<sub>1 </sub>phase arrest in DFMO-treated Y79 cells by binding with E2F-4.</p>
         <p>Although the mechanism of accumulation of hypophosphorylated forms of p107 remains to be elucidated, CDK inhibitors may be the most possible regulators, as p107 contains multiple CDK phosphorylation sites <abbrgrp><abbr bid="B18">18</abbr></abbrgrp>. There may be other factors that control cell cycle. However, since targeted disruption of three Rb-related genes leads to loss of cell cycle control <abbrgrp><abbr bid="B25">25</abbr></abbrgrp>, pRb family proteins are suggested to be involved in downstream pathway of cell cycle control. Therefore, p107 and p130 may be principal factors in controlling cell cycle in pRb deficient cells.</p>
         <p>In conclusion, we report here that DFMO induced G<sub>1 </sub>and S phase arrest of Y79 cells and the cell cycle arrest was mediated through dephosphorylation of p107 and accumulation of p107/E2F-4 complex which repress E2F transcriptional activity.</p>
      </sec>
      <sec>
         <st>
            <p>Methods</p>
         </st>
         <sec>
            <st>
               <p>Cells and reagents</p>
            </st>
            <p>The human retinoblastoma cell line Y79 and the human T cell lymphoma cell line Jurkat were obtained from the RIKEN cell bank (Tsukuba, Japan). Cells were cultured in RPMI 1640 medium with 10% fetal bovine serum (FBS) (JRH Biosciences, Lenexa, KS) in humidified air with 5 % CO<sub>2 </sub>at 37&#176;C. DFMO was kindly provided by Dr. P. McCann, Merrell Dow Research Center. The antibodies against p16, p27, p107, p130, E2F-1, E2F-2, E2F-4, E2F-5, B-Myb, cytochrome c, and c-Myc were purchased from Santa Cruz Biotechnology (Santa Cruz, CA). The antibody against p21 was obtained from BD Transduction Laboratories (Franklin Lakes, NJ). The antibodies against E2F-3 and MCM7 were obtained from Neo Markers (Fremont, CA). Propidium iodide and protein A-sepharose CL4B are obtained from Sigma. The antibody against pRb was obtained from New England BioLabs (Beverly, MA). The wild and mutant E2F oligonucleotides were obtained from Santa Cruz Biotechnology. [&#947;-<sup>32</sup>P]ATP and T4 polynucleotide kinase were purchased from Amersham Biosciences (Tokyo, Japan). The reporter plasmid pE2WTx4-Luc was kindly provided by Dr. Kiyoshi Ohtani <abbrgrp><abbr bid="B38">38</abbr></abbrgrp>. Dual luciferase reporter assay system and pRL-CMV vector were purchased from Promega (Madison, WI). FuGene&#8482;6 Transfection Reagent was purchased from Roche.</p>
         </sec>
         <sec>
            <st>
               <p>General experimental protocols</p>
            </st>
            <p>Cells (10<sup>5 </sup>cells/ml) were treated with or without 5 mM DFMO, or 5 mM DFMO and 20 &#956;M putrescine for the indicated times. At 0 h, 24 h, 48 h, 72 h, and 96 h, the cells in each treatment group were collected. Viable cells were counted using trypan blue exclusion method.</p>
         </sec>
         <sec>
            <st>
               <p>ODC enzyme assay and polyamine analysis</p>
            </st>
            <p>ODC activity was determined using DL- [l-<sup>14</sup>C]-ornithine as a substrate, as described previously <abbrgrp><abbr bid="B39">39</abbr></abbrgrp>. Polyamine analysis was determined using high-performance liquid chromatography (HPLC) as described <abbrgrp><abbr bid="B40">40</abbr></abbrgrp>.</p>
         </sec>
         <sec>
            <st>
               <p>Cell cycle analysis</p>
            </st>
            <p>At 0 h, 24 h, 48 h, and 72 h, the cells were collected and washed twice with PBS and fixed with chilled 70 % ethanol on ice for 30 minutes, treated with RNase A (0.5 mg/ml) for 20 minutes at 37&#176;C, and stained with 50 mg/ml propidium iodide for 30 minutes at 4&#176;C. Stained cells were analyzed using EPICS XL flow cytometer (Beckman Coulter, Tokyo, Japan) and WinCycle software (Phoenix Flow Systems, Inc, San Diego, CA).</p>
         </sec>
         <sec>
            <st>
               <p>Immunoprecipitation and western blot analysis</p>
            </st>
            <p>For immunoprecipitation, whole cell extracts (100 &#956;g protein) were incubated at 4&#176;C for 16 h with specific antibodies prebound to protein A-sepharose CL-4B prewashed in IP buffer (50 mM HEPES, pH 7.4, containing 150 mM NaCl, 10 mM EDTA, 100 mM NaF, and 2 mM sodium orthovanadate). For western blotting, extracted proteins (100 &#956;g) were separated by SDS polyacrylamide gel electrophoresis, transferred to nitrocellulose membrane, probed with diluted antibody (1:1,000), and visualized by ECL (Amersham Biosciences). Quantification of the bands was performed using NIH image Version 1.62 (Wayne Rasband, National Institutes of Health, U.S.A). The protein concentration was measured using a Bradford assay kit (Bio-Rad, Hercules, CA).</p>
         </sec>
         <sec>
            <st>
               <p>Electrophoretic mobility shift assays</p>
            </st>
            <p>At 0 h, 24 h, and 48 h, the cells were collected and washed twice with PBS. Nuclear extracts were prepared as described <abbrgrp><abbr bid="B41">41</abbr></abbrgrp>. The sequences of the E2F oligonucleotides used were 5'-ATTTAAGTTTCG<ul>CG</ul>CCCTTTCTCAA-3' (wild) and 5'-ATTTAAGTTTCG<ul>AT</ul>CCCTTTCTCAA-3' (mutant). The wild type oligonucleotides were labeled with [&#947;-<sup>32</sup>P] ATP and T4 polynucleotide kinase. Ten &#956;g of nuclear extracts were incubated for 20 min at room temperature in 12.5 mM HEPES buffer (pH 7.9), containing 100 mM KCl, 10% glycerol, 0.1 mM EDTA, 0.75 mM DTT, 0.2 mM phenylmethylsulfonyl floride, 3 &#956;g of poly (dI-dC), and <sup>32</sup>P-labeled E2F probe (10,000 cpm). For competition, 50 ng of unlabeled competitor was added. For antibody studies, extracts were preincubated with 4 &#956;g of antibody for 20 min at room temperature. The reaction mixtures were seperated on 6 % nondenaturing polyacrylamide (37.5:1) gels. The gels were autoradiographed using Fujix Bio Imaging Analyzer BAS2000 (Fujifilm, Tokyo, Japan).</p>
         </sec>
         <sec>
            <st>
               <p>Transient transfection and promoter assay</p>
            </st>
            <p>One &#956;g of pE2WTx4-Luc and 10 ng of pRL-CMV was co-transfected into Y79 cells (5 &#215; 10<sup>5</sup>) using FuGene&#8482;6 Transfection Reagent according to the manufacturer's instruction (Roche). After 24 h culture media were changed to RPMI 1640 media with or without 5 mM DFMO, or 5 mM DFMO and 20 &#956;M putrescine. Promoter activities were analyzed by dual luciferase reporter assay system according to the manufacturer's protocol (Promega).</p>
         </sec>
         <sec>
            <st>
               <p>Statistical analysis</p>
            </st>
            <p>Data from two independent experiments performed in triplicate are presented as mean &#177; SD unless otherwise indicated. Statistical analysis was performed using analysis of variance, with comparison of different groups by Fisher's partial least-squares difference (PLSD) test (Statview 4; Abacus Concepts, Berkeley, CA). The P value less than 0.05 was considered to be significant.</p>
         </sec>
      </sec>
      <sec>
         <st>
            <p>Authors' contributions</p>
         </st>
         <p>AY did all of the experiments. MA and SK showed and helped how to do the experiments side by side. SK organized whole the experiment. Three authors read the final version of the manuscript.</p>
      </sec>
   </bdy>
   <bm>
      <ack>
         <sec>
            <st>
               <p>Acknowledgements</p>
            </st>
            <p>We thank Dr. K. Ohtani, Tokyo Medical and Dental University, for the generous gift of pE2WTx4-Luc and pE2MTx4-Luc plasmids. This work was supported by a grant under the Ministry of Education, Science, Sports, and Culture, Japan.</p>
         </sec>
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